Co-folding Tools

Date	Name	Title	Target	Code/Server
12-Feb-24	NeuralPLexer	State-specific protein?ligand complex structure prediction with a multiscale deep generative model	Protein-ligands	Link
7-Mar-24	RosettaFold-AA	Generalized biomolecular modeling and design with RoseTTAFold All-Atom	All atoms	Link
8-May-24	AF3	Accurate structure prediction of biomolecular interactions with AlphaFold 3	All atoms	Link
28-May-24	Umol	Structure prediction of protein-ligand complexes from sequence information with Umol	Protein-ligands	Link
30-Aug-24	HelixFold3	Technical Report of HelixFold3 for Biomolecular Structure Prediction	All atoms	Link
15-Oct-24	Chai	Chai-1: Decoding the molecular interactions of life	All atoms	Link
27-Dec-24	Boltz-1	Boltz-1: Democratizing Biomolecular Interaction Modeling	All atoms	Link
11-Jan-25	Protenix	Protenix - Advancing Structure Prediction Through a Comprehensive AlphaFold3 Reproduction	All atoms	Link
18-Jun-25	Boltz-2	Boltz-2: Towards Accurate and Efficient Binding Affinity Prediction	All atoms	Link